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Fixing ASPM and Deep C-States on Intel NUC 7th gen

If you own an Intel NUC and are struggling to reach deep power-saving states like C8 or C9, your issue might be related to PCIe Active State Power Management (ASPM). I recently ran into this problem with my Intel NUC 7th Gen, where the system was stuck at C3 states despite my best efforts to tweak Linux power settings.

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LaTeX in Visual Studio Code (VSCode) on macOS

When writing my thesis, I found Overleaf to be a bit too minimalistic for managing a large project such as a PhD Thesis. Installing LaTeX in Visual Studio Code (VSCode) really helped me to work in a modern, customizable text editor. In this post, we’ll go through the process of installing LaTeX on macOS using Homebrew, configuring VSCode with LaTeX Workshop, and syncing with Overleaf for collaborative writing and reviewing. Please note that the LaTeX installation can take a while, since updating and downloading packages can be time-consuming....

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Remote software development with VSCode and Docker Compose

Modern software development often requires us to juggle multiple services and environments. When you add the constraint of sensitive data or specific hardware requirements, this complexity can grow. Fortunately, tools like VSCode, Docker, and SSH are here to simplify our lives. In this post, we’ll walk through setting up a development environment that leverages a virtual machine (VM) remotely, providing both security and flexibility.

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Millions of cells in Pathology Images: calculating cell density

We all know that digital pathology demands efficient handling of large-scale images. However, I hadn’t anticipated that the sheer volume of cell detections would significantly impact the performance of my cell density calculations within these images. This article combines the ease of WholeSlideData, shapely, rasterio, and geopandas to achieve this in a fast and simple way.

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My GitHub repositories

dekeukenvandael.nl

This repo contains the sourcecode of the website https://dekeukenvandael.nl, a hobby food blog project.

HTML Last updated: 2025-01-05 ⭐ 0 🍴 0

report-translator

Out-of-the-box translate medical reports from a specified input language to English using the GPT4All framework.

Python Last updated: 2024-10-14 ⭐ 1 🍴 0

escaperoom_server

This application allows you to create and manage a digital escape room experience using Django combined with Wagtail CMS.

Python Last updated: 2024-02-25 ⭐ 0 🍴 0

deepops-slurmjob

Package for starting slurm interactive sessions via your local CLI.

Python Last updated: 2024-01-24 ⭐ 8 🍴 4

simple_wsi_viewer

A simple web application for for viewing and navigating pathology whole-slide-images in your browser.

JavaScript Last updated: 2023-09-22 ⭐ 13 🍴 2
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Daan Geijs

Machine Learning Engineer @ kaiko.ai

| Integrating AI in the clinical workflow |